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ytcD [2017-12-11 11:58:35]
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ytcD [2017-12-11 11:58:35]

MarR/DUF24 family transcription regulator
locus
BSU29030
pI
7.76
mw
14.35 kDa
protein length
126 aa Sequence Blast
gene length
378 bp Sequence Blast
function
unknown
product
MarR/DUF24 family transcription regulator
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    2,968,260 → 2,968,640

    The protein

    Protein family

  • [[MarR/DUF24 family]]

    • Structure

  • [PDB|2HZT]

    • Expression and Regulation

    Operons

    genes
    [gene|1E74F0557FF9ECB404B6544831F4E0A162473423|ytcD]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A120 (ytcD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/120 NBRP B. subtilis, Japan]
  • BKE29030 (Δ[gene|1E74F0557FF9ECB404B6544831F4E0A162473423|ytcD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAATCCATTCTCCTCA, downstream forward: _UP4_TAAAGCATGAGGGCAGTCAG
  • BKK29030 (Δ[gene|1E74F0557FF9ECB404B6544831F4E0A162473423|ytcD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAATCCATTCTCCTCA, downstream forward: _UP4_TAAAGCATGAGGGCAGTCAG